Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_04310 | Not Available | - | 927348 - 927788 | 16543.1 |
| hypothetical protein | EXZ48_04315 | Not Available | - | 927902 - 929578 | 59627.2 |
| l-arabinose abc transporter permease arah | EXZ48_04320 | Not Available | - | 929962 - 930912 | 32742.3 |
| l-arabinose abc transporter atp-binding protein arag | EXZ48_04325 | Not Available | - | 930909 - 932423 | 55182.0 |
| arabinose abc transporter substrate-binding protein | EXZ48_04330 | Not Available | - | 932504 - 933487 | 34352.1 |
| fadr family transcriptional regulator | EXZ48_04335 | Not Available | + | 933676 - 934446 | 28354.0 |
| galactonate dehydratase | EXZ48_04340 | Not Available | + | 934481 - 935629 | 42435.8 |
| sdr family oxidoreductase | EXZ48_04345 | Not Available | + | 935641 - 936417 | 27000.6 |
| rok family transcriptional regulator | EXZ48_04350 | Not Available | - | 936661 - 937866 | 42875.6 |
| extracellular solute-binding protein | EXZ48_04355 | Not Available | + | 938085 - 939323 | 44386.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.