Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate dehydrogenase/oxidase | EXZ48_04260 | Not Available | + | 906056 - 907786 | 61666.3 |
| hypothetical protein | EXZ48_04265 | Not Available | + | 907786 - 908781 | 36007.8 |
| hypothetical protein | EXZ48_04270 | Not Available | - | 908864 - 915655 | 222524.0 |
| beta-n-acetylhexosaminidase | EXZ48_04275 | Not Available | - | 915837 - 917861 | 72838.5 |
| n-acetyltransferase | EXZ48_04280 | Not Available | - | 917858 - 918334 | 16781.2 |
| fdhf/ydep family oxidoreductase | EXZ48_04285 | Not Available | + | 918498 - 920792 | 83188.3 |
| hypothetical protein | EXZ48_04290 | Not Available | + | 920789 - 921076 | 10159.3 |
| hypothetical protein | EXZ48_04295 | Not Available | - | 921069 - 923201 | 76972.5 |
| methyltransferase domain-containing protein | EXZ48_04300 | Not Available | - | 923246 - 925243 | 73334.4 |
| glycosyltransferase | EXZ48_04305 | Not Available | - | 925132 - 927351 | 82709.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.