Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | EXZ48_04105 | Not Available | - | 875222 - 875788 | 20424.4 |
| gfo/idh/moca family oxidoreductase | EXZ48_04110 | Not Available | - | 875821 - 876906 | 40368.2 |
| carbohydrate abc transporter permease | EXZ48_04115 | Not Available | - | 876936 - 877775 | 30778.7 |
| sugar abc transporter permease | EXZ48_04120 | Not Available | - | 877777 - 878685 | 33578.8 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EXZ48_04125 | Not Available | - | 878687 - 879760 | 39263.7 |
| rok family protein | EXZ48_04130 | Not Available | - | 879757 - 880701 | 32747.1 |
| hypothetical protein | EXZ48_04135 | Not Available | - | 880698 - 881483 | 27543.1 |
| hypothetical protein | EXZ48_04140 | Not Available | - | 881480 - 882469 | 36578.2 |
| abc transporter substrate-binding protein | EXZ48_04145 | Not Available | - | 882482 - 883732 | 44776.6 |
| glycerate kinase | EXZ48_04150 | Not Available | - | 883894 - 885069 | 40327.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.