Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Large packaging protein | EXZ48_05895 | Not Available | + | 1257654 - 1258820 | 41835.0 |
| Hypothetical protein | EXZ48_05900 | Not Available | + | 1258822 - 1259433 | 22627.2 |
| Portal protein | EXZ48_05905 | Not Available | + | 1259642 - 1260775 | 41227.0 |
| hypothetical protein | EXZ48_05910 | Not Available | + | 1261164 - 1261472 | 10592.1 |
| Putative prohead protease | EXZ48_05915 | Not Available | + | 1261598 - 1262155 | 20630.0 |
| Major capsid protein | EXZ48_05920 | Not Available | + | 1262233 - 1263474 | 44197.4 |
| Dna packaging/head-tail-connector | EXZ48_05925 | Not Available | + | 1263718 - 1264287 | 20541.0 |
| Head closure protein | EXZ48_05930 | Not Available | + | 1264287 - 1264625 | 12118.6 |
| Tail protein | EXZ48_05935 | Not Available | + | 1264622 - 1265029 | 14332.0 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | EXZ48_05940 | Not Available | + | 1265057 - 1265464 | 14052.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.