Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_00005 | Not Available | - | 136 - 318 | 7047.32 |
| 16s ribosomal rna | Not Available | Not Available | + | 346 - 1888 | Not Available |
| hypothetical protein | EJI01_00010 | Not Available | + | 863 - 1198 | 12060.7 |
| hypothetical protein | EJI01_00015 | Not Available | - | 1251 - 1472 | 7852.55 |
| 23s ribosomal rna | Not Available | Not Available | + | 2450 - 5336 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 5462 - 5574 | Not Available |
| autotransporter outer membrane beta-barrel domain-containing protein | EJI01_00030 | Not Available | - | 4338 - 7886 | 116419.0 |
| Trna-pro | Not Available | Not Available | + | 9214 - 9290 | Not Available |
| glutathione s-transferase family protein | EJI01_00045 | Not Available | - | 9331 - 10035 | 26266.8 |
| fad-dependent oxidoreductase | EJI01_00050 | Not Available | - | 10119 - 11804 | 59363.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.