Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Alteromonadaceae
Genus
Agarivorans
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Alteromonadaceae |
| Genus | Agarivorans |
| Species | Agarivorans sp. Toyoura001 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agarivorans sp. Toyoura001
Accession NumberBJEQ00000000.1
Gene Summary
Adenine Count
1309845 bp
Thymine Count
1292608 bp
Guanine Count
1019485 bp
Cytosine Count
1044271 bp
Genome Length
4666209 bp
Protein-coding Genes
4257 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase e | AHAT_35050 | Not Available | - | 3823653 - 3824285 | 23598.7 |
| isocitrate dehydrogenase, nadp-dependent | AHAT_35060 | Not Available | + | 3824500 - 3826722 | 79961.1 |
| cold shock domain protein cspd | AHAT_35070 | Not Available | - | 3826867 - 3827082 | 7812.09 |
| atp-dependent clp protease adapter protein clps | AHAT_35080 | Not Available | + | 3827275 - 3827592 | 11915.3 |
| atp-dependent clp protease atp-binding subunit clpa | AHAT_35090 | Not Available | + | 3827628 - 3829880 | 83263.6 |
| translation initiation factor if-1 | AHAT_35100 | Not Available | - | 3829950 - 3830168 | 8219.09 |
| putative arginyl-trna--protein transferase | AHAT_35110 | Not Available | - | 3830252 - 3830935 | 26552.6 |
| leucyl/phenylalanyl-trna--protein transferase | AHAT_35120 | Not Available | - | 3830935 - 3831624 | 26048.1 |
| thioredoxin reductase | AHAT_35130 | Not Available | - | 3831737 - 3832693 | 34090.3 |
| leucine-responsive regulatory protein | AHAT_35140 | Not Available | + | 3833134 - 3833601 | 17880.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.