Prochlorococcus marinus XMU1408

Gram-negativeCocciNon-motile

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Prochlorococcaceae

Genus

Prochlorococcus

Description

Prochlorococcus marinus XMU1408 is a gram-negative, coccoid cyanobacterium that thrives in marine aquatic environments. As a photosynthetic organism, it harnesses light energy to drive its metabolic processes, contributing significantly to primary production in oligotrophic waters. This strain is characterized by its small cell size, which facilitates efficient nutrient uptake in nutrient-poor habitats. Prochlorococcus marinus is known for its remarkable adaptability to various light conditions, allowing it to occupy niches where other phytoplankton may struggle to survive. The presence of specialized pigments enables Prochlorococcus marinus XMU1408 to absorb light at different wavelengths, optimizing its photosynthetic efficiency in varying depths of the water column. This adaptability not only highlights its ecological significance but also underscores its role in carbon cycling within marine ecosystems. Given its proficiency in utilizing light energy and its prevalence in open ocean waters, Prochlorococcus marinus XMU1408 serves as a crucial player in the marine food web and contributes to the overall biogeochemical processes in the ocean. Its existence emphasizes the importance of microbial life in maintaining the health and balance of marine environments, particularly in regions where nutrient availability is limited.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilyProchlorococcaceae
GenusProchlorococcus
SpeciesProchlorococcus marinus
StrainXMU1408

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Prochlorococcus marinus XMU1408
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourcePhotosynthetic
PathogenicityNot Available

Genome Summary

Prochlorococcus marinus XMU1408


Gene Summary

Adenine Count

590450 bp

Thymine Count

591746 bp

Guanine Count

307476 bp

Cytosine Count

305475 bp

Genome Length

1795147 bp

Protein-coding Genes

1871 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dna polymerase iii subunit betaDNJ73_00005Not Available+179 - 133941983.1
hypothetical proteinDNJ73_00010Not Available+1342 - 212430205.3
phosphoribosylformylglycinamidine synthase subunit purlDNJ73_00015Not Available+2128 - 453988167.0
amidophosphoribosyltransferaseDNJ73_00020Not Available+4600 - 605754364.2
topoisomerase ivDNJ73_00025Not Available-6054 - 853493411.4
hypothetical proteinDNJ73_00030Not Available-8618 - 948732839.2
trna epoxyqueuosine(34) reductase quegDNJ73_00035Not Available-9490 - 1042835761.2
hypothetical proteinDNJ73_00040Not Available+10619 - 1134726481.4
transcription antitermination factor nusbDNJ73_00045Not Available+11368 - 1198823606.6
signal recognition particle-docking protein ftsyDNJ73_00050Not Available+11991 - 1328047284.5

Displaying genes 1 – 10 of 1915 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

195 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm00007183-maleylpyruvateC7H4O6Chemical structure of 3-maleylpyruvateNot available
Average184.104Da
Monoisotopic184.001885009Da

Displaying 1–10 of 195 metabolites