Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | DF947_00045 | Not Available | + | 6851 - 7432 | 21381.6 |
| abc transporter atp-binding protein | DF947_00050 | Not Available | - | 7463 - 9298 | 69120.7 |
| hypothetical protein | DF947_00055 | Not Available | - | 9540 - 9956 | 14957.4 |
| arac family transcriptional regulator | DF947_00060 | Not Available | - | 10202 - 11125 | 35415.4 |
| nad-dependent dehydratase | DF947_00065 | Not Available | - | 11142 - 12068 | 34181.7 |
| 3-beta hydroxysteroid dehydrogenase | DF947_00070 | Not Available | - | 12119 - 13009 | 31567.5 |
| arac family transcriptional regulator | DF947_00075 | Not Available | - | 13191 - 14048 | 32833.4 |
| hypothetical protein | DF947_00080 | Not Available | + | 14249 - 14737 | 17764.1 |
| hypothetical protein | DF947_00085 | Not Available | + | 15019 - 15600 | 22217.9 |
| rna polymerase subunit sigma-70 | DF947_00090 | Not Available | + | 15769 - 16350 | 22609.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.