Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudodesulfovibrio hydrargyri str. BerOc1
Accession NumberLKAQ00000000.1
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inner membrane abc transporter permease protein ydcv | BerOc1_00833 | Not Available | + | 911168 - 911950 | 28868.1 |
| d-hydantoinase/dihydropyrimidinase | BerOc1_00834 | Not Available | + | 911971 - 913371 | 51041.9 |
| limonene hydroxylase | BerOc1_00835 | Not Available | - | 913623 - 915389 | 65345.4 |
| tripartite atp-independent periplasmic transporter, dctq component | BerOc1_00836 | Not Available | + | 915742 - 916281 | 19738.6 |
| sialic acid trap transporter permease protein siat | BerOc1_00837 | Not Available | + | 916281 - 917564 | 45116.8 |
| sialic acid-binding periplasmic protein siap precursor | BerOc1_00838 | Not Available | + | 917589 - 918623 | 37201.1 |
| threonine synthase | BerOc1_00839 | Not Available | + | 918695 - 919978 | 45608.4 |
| cysteine synthase | BerOc1_00840 | Not Available | + | 919999 - 921465 | 53919.2 |
| succinyl-diaminopimelate desuccinylase | BerOc1_00841 | Not Available | + | 921474 - 922667 | 42324.6 |
| n-acyl-d-aspartate deacylase | BerOc1_00842 | Not Available | + | 922684 - 924273 | 57727.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.