Simplicispira suum str. SC1-8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Simplicispira

Description

Simplicispira suum str. SC1-8 is characterized by having a single replicon, which suggests a streamlined genomic organization. This trait may be indicative of its adaptation to specific ecological niches or metabolic pathways. The organism is cataloged under the accession number NZ_CP027671.1, providing a reference point for genomic studies and further research. Understanding the genomic structure of Simplicispira suum str. SC1-8 could inform on its evolutionary strategies and interactions within its environment. The presence of a single replicon may facilitate efficient replication and resource utilization, allowing it to thrive in particular conditions. This characteristic could also influence its genetic stability and adaptability to changing environments. In the broader context of microbial ecology, the genomic traits of Simplicispira suum str. SC1-8 may contribute to our understanding of microbial community dynamics, especially in environments where this organism is present. The streamlined genetic architecture could provide insights into niche specialization and the organism's role in biogeochemical cycles. Overall, the genomic traits of Simplicispira suum str. SC1-8, particularly its single replicon, underscore its potential adaptations and ecological significance within microbial communities. Further research into its metabolism and interactions could reveal more about its functional roles in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusSimplicispira
SpeciesSimplicispira suum
StrainSC1-8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Simplicispira suum str. SC1-8


Gene Summary

Adenine Count

19674 bp

Thymine Count

19310 bp

Guanine Count

29047 bp

Cytosine Count

29124 bp

Genome Length

97155 bp

Protein-coding Genes

107 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter substrate-binding protein dctpC6571_RS19145Not AvailableNegative48068 - 4897333747.3
sdr family oxidoreductaseC6571_RS19150Not AvailableNegative49224 - 5003628868.6
gntr family transcriptional regulatorC6571_RS19155Not AvailableNegative50038 - 5075126849.0
helix-turn-helix domain-containing proteinC6571_RS20120Not AvailablePositive51128 - 512855140.84
catechol 2,3-dioxygenaseC6571_RS19170Not AvailablePositive52026 - 5296734862.4
helix-turn-helix domain-containing proteinC6571_RS19175Not AvailableNegative53141 - 532574401.27
helix-turn-helix domain-containing proteinC6571_RS19180Not AvailablePositive54386 - 545866994.15
is21-like element helper atpase istbC6571_RS19185Not AvailablePositive54583 - 5534128726.6
helix-turn-helix domain-containing proteinC6571_RS19190Not AvailablePositive55393 - 5617529647.1
hypothetical proteinC6571_RS19195Not AvailableNegative56240 - 564647966.8

Displaying genes 51 – 60 of 107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.