Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excisionase | C5E05_05015 | Not Available | - | 1041954 - 1042148 | 7117.39 |
| Hth-xre dna-binding domain protein | C5E05_05020 | Not Available | - | 1042187 - 1042438 | 8759.61 |
| Hypothetical protein | C5E05_05025 | Not Available | + | 1042519 - 1042902 | 13748.0 |
| Peptidase | C5E05_05030 | Not Available | + | 1042971 - 1043321 | 13532.6 |
| Attr | Not Available | Not Available | + | 1043265 - 1043277 | Not Available |
| Integrase | C5E05_05035 | Not Available | + | 1043324 - 1044427 | 39806.9 |
| mini-circle protein | C5E05_05040 | Not Available | + | 1044581 - 1045123 | 20079.4 |
| Hypothetical protein | C5E05_05045 | Not Available | + | 1045219 - 1046025 | 27877.0 |
| 5s ribosomal rna | Not Available | Not Available | + | 56 - 172 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 302 - 3513 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.