Pseudoclavibacter sp. AY1H1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. AY1H1 is a notable bacterium characterized by its single replicon structure, indicating a streamlined genomic organization. The genomic sequence of this organism is cataloged under the accession number PSXX00000000.1, which provides a reference point for studies pertaining to its genetic makeup. The classification of Pseudoclavibacter sp. suggests a relationship with other members of the Actinobacteria phylum, known for their diverse metabolic capabilities and ecological roles. Although specific traits regarding its metabolic pathways or ecological interactions are not provided, members of this genus typically participate in soil and plant-associated environments, which could imply potential interactions with plant systems or contributions to soil health. In summary, Pseudoclavibacter sp. AY1H1 is distinguished by its singular replicon and accession number PSXX00000000.1. While further details about its ecological roles remain unspecified, the characteristics of the Pseudoclavibacter genus suggest potential significance in environmental microbiology, particularly in soil ecosystems. This highlights the importance of studying such organisms to better understand their contributions to biogeochemical cycles and plant health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. AY1H1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. AY1H1


Gene Summary

Adenine Count

664956 bp

Thymine Count

661191 bp

Guanine Count

1429804 bp

Cytosine Count

1446370 bp

Genome Length

4202523 bp

Protein-coding Genes

3778 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinC5E05_00755Not AvailableNegative170069 - 17096531739.4
abc transporter atp-binding proteinC5E05_00760Not AvailablePositive171205 - 17215233501.1
hypothetical proteinC5E05_00765Not AvailablePositive172128 - 17369954530.6
duf3039 domain-containing proteinC5E05_00770Not AvailablePositive173742 - 17403210520.4
nicotinate phosphoribosyltransferaseC5E05_00775Not AvailableNegative174143 - 17548347551.1
glutamate racemaseC5E05_00780Not AvailablePositive175574 - 17640729847.7
ribonuclease phC5E05_00785Not AvailablePositive176458 - 17718925753.7
non-canonical purine ntp pyrophosphatase, rdgb/ham1 familyC5E05_00790Not AvailablePositive177186 - 17780921763.5
aspartate aminotransferase family proteinC5E05_00795Not AvailableNegative178121 - 17949750608.9
Trna-leuNot AvailableNot AvailablePositive179653 - 179734Not Available

Displaying genes 241 – 250 of 3882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.