Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia sp. E4385 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia sp. E4385
Accession NumberVATU00000000.1
Gene Summary
Adenine Count
1212776 bp
Thymine Count
1206788 bp
Guanine Count
1239673 bp
Cytosine Count
1239842 bp
Genome Length
4899277 bp
Protein-coding Genes
4410 genes
Non-Coding Genes
298 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | FEK49_08175 | Not Available | - | 1697752 - 1698201 | 16661.4 |
| type vi secretion system baseplate subunit tssf | FEK49_08180 | Not Available | - | 1698194 - 1698439 | 9373.97 |
| type vi secretion system protein tssa | FEK49_08185 | Not Available | - | 1698669 - 1700264 | 58646.6 |
| type vi secretion system atpase tssh | FEK49_08190 | Not Available | - | 1700366 - 1703005 | 98029.7 |
| hcp family type vi secretion system effector | FEK49_08195 | Not Available | - | 1703182 - 1703673 | 18786.0 |
| type vi secretion system contractile sheath large subunit | FEK49_08210 | Not Available | - | 1704643 - 1706190 | 57888.8 |
| type vi secretion system contractile sheath small subunit | FEK49_08215 | Not Available | - | 1706224 - 1706721 | 18561.4 |
| hypothetical protein | FEK49_08220 | Not Available | + | 1707364 - 1707855 | 18467.3 |
| duf1311 domain-containing protein | FEK49_08225 | Not Available | + | 1707852 - 1708187 | 12616.4 |
| kpsf/gutq family sugar-phosphate isomerase | FEK49_08230 | Not Available | + | 1708910 - 1709893 | 35650.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism
