Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Larkinella rosea str. KCTC52004
Accession NumberRQJO00000000.1
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | EHT25_28605 | Not Available | - | 7166652 - 7168925 | 85494.1 |
| hypothetical protein | EHT25_28610 | Not Available | - | 7169103 - 7169747 | 24153.4 |
| mfs transporter | EHT25_28615 | Not Available | - | 7170094 - 7171374 | 46213.7 |
| tlpa family protein disulfide reductase | EHT25_28620 | Not Available | - | 7171499 - 7172728 | 45487.4 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | EHT25_28625 | Not Available | + | 7172929 - 7173855 | 34447.2 |
| hypothetical protein | EHT25_28630 | Not Available | + | 7173879 - 7174280 | 15446.8 |
| pasta domain-containing protein | EHT25_28635 | Not Available | + | 7174277 - 7176451 | 81250.1 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | EHT25_28640 | Not Available | + | 7176482 - 7177936 | 53397.9 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | EHT25_28645 | Not Available | + | 7178091 - 7179308 | 45214.2 |
| dmt family transporter | EHT25_28650 | Not Available | + | 7179407 - 7180270 | 31978.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.