Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Larkinella rosea str. KCTC52004
Accession NumberRQJO00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | EHT25_01040 | Not Available | - | 221629 - 222930 | 48730.2 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | EHT25_01045 | Not Available | - | 222953 - 224377 | 53880.4 |
| outer membrane protein assembly factor | EHT25_01050 | Not Available | - | 224593 - 227235 | 100645.0 |
| rna methyltransferase | EHT25_01055 | Not Available | + | 227255 - 228019 | 28256.9 |
| hypothetical protein | EHT25_01060 | Not Available | + | 228200 - 231430 | 121781.0 |
| dna-binding response regulator | EHT25_01065 | Not Available | + | 231554 - 232204 | 24288.7 |
| susc/raga family tonb-linked outer membrane protein | EHT25_01070 | Not Available | + | 232493 - 235693 | 116071.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT25_01075 | Not Available | + | 235717 - 237258 | 56101.3 |
| hypothetical protein | EHT25_01080 | Not Available | + | 237490 - 237933 | 16646.3 |
| nuclear transport factor 2 family protein | EHT25_01085 | Not Available | - | 238051 - 238923 | 31907.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.