Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Larkinella knui str. KCTC42998
Accession NumberRQJP00000000.1
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | EHT87_28435 | Not Available | - | 6950116 - 6950877 | 27035.4 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | EHT87_28440 | Not Available | - | 6950920 - 6951639 | 26713.2 |
| imidazole glycerol phosphate synthase subunit hish | EHT87_28445 | Not Available | - | 6951710 - 6952309 | 22087.6 |
| duf72 domain-containing protein | EHT87_28450 | Not Available | - | 6952479 - 6953405 | 35417.9 |
| valine--trna ligase | EHT87_28455 | Not Available | + | 6953608 - 6956274 | 102320.0 |
| hypothetical protein | EHT87_28460 | Not Available | - | 6956356 - 6957450 | 41107.1 |
| had family hydrolase | EHT87_28465 | Not Available | + | 6957629 - 6958150 | 19589.5 |
| arginine decarboxylase | EHT87_28470 | Not Available | - | 6958351 - 6959841 | 57241.8 |
| peptidoglycan synthetase | EHT87_28475 | Not Available | + | 6960172 - 6961527 | 50393.1 |
| dehydrogenase | EHT87_28480 | Not Available | - | 6961623 - 6964556 | 107725.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.