Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | EHT87_06775 | Not Available | + | 1658380 - 1659009 | 23194.6 |
| hypothetical protein | EHT87_06780 | Not Available | - | 1659152 - 1659274 | 4347.1 |
| sigma-70 family rna polymerase sigma factor | EHT87_06785 | Not Available | + | 1659221 - 1659832 | 23946.5 |
| fecr family protein | EHT87_06790 | Not Available | + | 1659902 - 1661011 | 42153.9 |
| tonb-dependent receptor | EHT87_06795 | Not Available | + | 1661162 - 1664515 | 120102.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_06800 | Not Available | + | 1664528 - 1665970 | 52117.1 |
| polysaccharide pyruvyl transferase family protein | EHT87_06805 | Not Available | + | 1666043 - 1667320 | 47311.2 |
| polysaccharide pyruvyl transferase family protein | EHT87_06810 | Not Available | + | 1667313 - 1668602 | 48455.9 |
| alpha/beta hydrolase | EHT87_06815 | Not Available | - | 1668599 - 1669513 | 33895.1 |
| arac family transcriptional regulator | EHT87_06820 | Not Available | - | 1669513 - 1670325 | 31684.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.