Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. LB126 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1026363 bp
Thymine Count
1026739 bp
Guanine Count
1780709 bp
Cytosine Count
1793585 bp
Genome Length
5627691 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyl transferase subunit alpha | CAF53_03540 | Not Available | Negative | 744032 - 744976 | 33502.2 |
| recombinase xerd | CAF53_03545 | Not Available | Negative | 744988 - 745905 | 32576.5 |
| hypothetical protein | CAF53_03550 | Not Available | Negative | 745905 - 747719 | 63590.8 |
| hypothetical protein | CAF53_03555 | Not Available | Negative | 747725 - 747913 | 6881.58 |
| shikimate kinase | CAF53_03560 | Not Available | Positive | 747994 - 748542 | 19999.3 |
| 3-dehydroquinate synthase | CAF53_03565 | Not Available | Positive | 748533 - 749645 | 39231.1 |
| ktsc domain-containing protein | CAF53_03570 | Not Available | Positive | 749884 - 750078 | 7603.16 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | CAF53_03575 | Not Available | Negative | 750100 - 751923 | 65264.8 |
| phosphohydrolase | CAF53_03580 | Not Available | Negative | 752005 - 752859 | 30726.0 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | CAF53_03585 | Not Available | Negative | 752873 - 754288 | 49621.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
