Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. LB126 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1026363 bp
Thymine Count
1026739 bp
Guanine Count
1780709 bp
Cytosine Count
1793585 bp
Genome Length
5627691 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription factor | CAF53_25335 | Not Available | + | 5325830 - 5326078 | 9065.81 |
| vapc toxin family pin domain ribonuclease | CAF53_25340 | Not Available | + | 5326075 - 5326464 | 14037.8 |
| copg family transcriptional regulator | CAF53_25345 | Not Available | + | 5326461 - 5326844 | 14750.2 |
| integrase | CAF53_25350 | Not Available | + | 5326841 - 5327800 | 35582.9 |
| atpase | CAF53_25360 | Not Available | + | 5329164 - 5330330 | 43022.6 |
| hypothetical protein | CAF53_25365 | Not Available | - | 5330338 - 5331033 | 25151.4 |
| ti-type conjugative transfer relaxase traa | CAF53_25370 | Not Available | - | 5331042 - 5333927 | 105569.0 |
| conjugal transfer protein trac | CAF53_25375 | Not Available | + | 5334096 - 5334344 | 9142.03 |
| conjugal transfer protein trad | CAF53_25380 | Not Available | + | 5334439 - 5334654 | 8131.66 |
| hypothetical protein | CAF53_25385 | Not Available | + | 5335489 - 5335965 | 17822.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
