Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein | EDD54_4282 | Not Available | - | 4633139 - 4634644 | 55165.5 |
| thiosulfate sulfurtransferase | EDD54_4283 | Not Available | - | 4634792 - 4635244 | 15892.8 |
| ssu ribosomal protein s20p | EDD54_4284 | Not Available | - | 4635897 - 4636163 | 9489.6 |
| dna-(apurinic or apyrimidinic site) lyase | EDD54_4285 | Not Available | - | 4636343 - 4637296 | 33830.4 |
| demethylmenaquinone methyltransferase | EDD54_4286 | Not Available | + | 4637431 - 4638189 | 28098.7 |
| 2-octaprenylphenol hydroxylase | EDD54_4287 | Not Available | + | 4638213 - 4639760 | 56274.2 |
| rhodanese-related sulfurtransferase | EDD54_4288 | Not Available | - | 4639750 - 4640172 | 14869.8 |
| arac family transcriptional regulator with amidase-like domain | EDD54_4289 | Not Available | + | 4640245 - 4641261 | 35388.6 |
| sugar/nucleoside kinase (ribokinase family) | EDD54_4290 | Not Available | - | 4641269 - 4642282 | 34797.5 |
| cysz protein | EDD54_4291 | Not Available | + | 4642378 - 4643082 | 24816.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
