Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDD54_0858 | Not Available | Negative | 930711 - 931718 | 33685.0 |
| [nife] hydrogenase assembly hybe family chaperone | EDD54_0859 | Not Available | Negative | 931715 - 932200 | 16943.0 |
| rubredoxin | EDD54_0860 | Not Available | Negative | 932190 - 932381 | 7108.3 |
| hydrogenase-1 operon protein hyaf | EDD54_0861 | Not Available | Negative | 932378 - 933247 | 30330.5 |
| hydrogenase-1 operon protein hyae | EDD54_0862 | Not Available | Negative | 933244 - 933690 | 15723.1 |
| hydrogenase expression/formation protein hypc | EDD54_0863 | Not Available | Negative | 933738 - 934037 | 10434.6 |
| urease accessory protein | EDD54_0864 | Not Available | Negative | 934052 - 934639 | 18898.9 |
| hydrogenase 1 maturation peptidase hyad | EDD54_0865 | Not Available | Negative | 934720 - 935298 | 20586.7 |
| ni/fe-hydrogenase 1 b-type cytochrome subunit | EDD54_0866 | Not Available | Negative | 935304 - 936050 | 28509.5 |
| hydrogenase large subunit | EDD54_0867 | Not Available | Negative | 936061 - 937851 | 65397.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
