Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nad+) | EDD54_0828 | Not Available | Negative | 895530 - 897062 | 53654.4 |
| lysr family glycine cleavage system transcriptional activator | EDD54_0829 | Not Available | Positive | 897241 - 898137 | 32173.5 |
| serine-glyoxylate aminotransferase | EDD54_0830 | Not Available | Positive | 898507 - 899694 | 43043.5 |
| beta-methylmalyl-coa/l-malyl-coa lyase | EDD54_0831 | Not Available | Positive | 899910 - 900869 | 34158.1 |
| malate thiokinase large subunit | EDD54_0832 | Not Available | Positive | 901118 - 902299 | 41936.6 |
| malate thiokinase small subunit | EDD54_0833 | Not Available | Positive | 902316 - 903218 | 30931.7 |
| glyoxylate reductase | EDD54_0834 | Not Available | Positive | 903446 - 904417 | 35175.4 |
| hypothetical protein | EDD54_0835 | Not Available | Positive | 904673 - 904882 | 6841.15 |
| hypothetical protein | EDD54_0836 | Not Available | Negative | 904895 - 905065 | 6229.48 |
| putative llm family oxidoreductase | EDD54_0837 | Not Available | Negative | 905359 - 906429 | 38403.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
