Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative o-linked n-acetylglucosamine transferase (spindly family) | EDD54_0638 | Not Available | Positive | 675883 - 677889 | 73172.3 |
| zinc transporter | EDD54_0639 | Not Available | Positive | 678038 - 679027 | 36567.3 |
| dna polymerase iii chi subunit | EDD54_0640 | Not Available | Negative | 679250 - 679702 | 16875.8 |
| leucyl aminopeptidase | EDD54_0641 | Not Available | Negative | 679882 - 681375 | 52204.0 |
| lipopolysaccharide export system permease protein | EDD54_0642 | Not Available | Positive | 681627 - 682808 | 41851.5 |
| lipopolysaccharide export system permease protein | EDD54_0643 | Not Available | Positive | 682805 - 683896 | 38427.0 |
| lps-assembly protein | EDD54_0644 | Not Available | Positive | 683899 - 686253 | 85335.1 |
| periplasmic chaperone for outer membrane proteins sura | EDD54_0645 | Not Available | Positive | 686376 - 687323 | 33908.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | EDD54_0646 | Not Available | Positive | 687323 - 688360 | 35280.7 |
| dimethyladenosine transferase | EDD54_0647 | Not Available | Positive | 688357 - 689220 | 30513.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
