Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional lysr family regulator | EDD54_0549 | Not Available | Positive | 574383 - 575267 | 31016.3 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 574712 - 576201 | Not Available |
| hypothetical protein | EDD54_0550 | Not Available | Negative | 575331 - 575984 | 24000.9 |
| cysteine desulfurase | EDD54_0551 | Not Available | Positive | 576278 - 577453 | 39523.3 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 577115 - 579948 | Not Available |
| iron-regulated abc transporter membrane component sufb | EDD54_0552 | Not Available | Positive | 577462 - 578982 | 56220.8 |
| nucleotidyltransferase-like protein | EDD54_0553 | Not Available | Positive | 578987 - 579355 | 13320.3 |
| hepn domain-containing protein | EDD54_0554 | Not Available | Positive | 579352 - 579774 | 15304.4 |
| fe-s cluster assembly atp-binding protein | EDD54_0555 | Not Available | Positive | 579778 - 580527 | 27080.7 |
| iron-regulated abc transporter permease protein sufd | EDD54_0556 | Not Available | Positive | 580541 - 581863 | 45769.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
