Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 (brf-2) | EDD54_0540 | Not Available | Positive | 561735 - 562866 | 42356.8 |
| murein dd-endopeptidase mepm/ murein hydrolase activator nlpd | EDD54_0541 | Not Available | Negative | 562993 - 564276 | 44488.4 |
| uncharacterized ferritin-like protein (duf455 family) | EDD54_0542 | Not Available | Negative | 564377 - 565222 | 30960.9 |
| peroxiredoxin q/bcp | EDD54_0543 | Not Available | Negative | 565233 - 565694 | 16277.5 |
| asma-like protein | EDD54_0544 | Not Available | Positive | 565882 - 569115 | 110078.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 568498 - 568549 | Not Available |
| chrd domain-containing protein | EDD54_0545 | Not Available | Negative | 569773 - 570204 | 14699.7 |
| tyrosyl-trna synthetase | EDD54_0546 | Not Available | Negative | 570748 - 572001 | 45628.1 |
| anhydro-n-acetylmuramic acid kinase | EDD54_0547 | Not Available | Positive | 572127 - 573275 | 37934.2 |
| putative integral membrane protein (tigr00698 family) | EDD54_0548 | Not Available | Negative | 573245 - 574282 | 33800.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
