Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycyl-trna synthetase beta chain | EDD54_0510 | Not Available | Negative | 533743 - 535782 | 73065.2 |
| magnesium transporter | EDD54_0511 | Not Available | Positive | 535943 - 537352 | 50586.3 |
| lysozyme | EDD54_0512 | Not Available | Positive | 537334 - 538179 | 31601.4 |
| uncharacterized protein yect (duf1311 family) | EDD54_0513 | Not Available | Positive | 538209 - 538706 | 17970.4 |
| atp-dependent clp protease protease subunit | EDD54_0514 | Not Available | Positive | 538879 - 539502 | 22587.9 |
| hypothetical protein | EDD54_0515 | Not Available | Positive | 539583 - 539927 | 12215.8 |
| uncharacterized sam-binding protein ycdf (duf218 family) | EDD54_0516 | Not Available | Positive | 539961 - 540755 | 28741.0 |
| uncharacterized protein duf3253 | EDD54_0517 | Not Available | Negative | 540781 - 541158 | 13933.5 |
| putative membrane protein | EDD54_0518 | Not Available | Negative | 541155 - 541862 | 26085.8 |
| uncharacterized protein duf2750 | EDD54_0519 | Not Available | Positive | 542627 - 543010 | 14218.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
