Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein ygdd (tmem256/duf423 family) | EDD54_0490 | Not Available | Positive | 513974 - 514336 | 11786.8 |
| polyhydroxyalkanoate synthase | EDD54_0491 | Not Available | Negative | 514362 - 516179 | 67606.8 |
| hypothetical protein | EDD54_0492 | Not Available | Positive | 516417 - 516827 | 13204.5 |
| alanine-synthesizing transaminase | EDD54_0493 | Not Available | Positive | 516973 - 518202 | 45011.2 |
| putative metallopeptidase duf4344 | EDD54_0494 | Not Available | Negative | 518920 - 519888 | 34978.2 |
| glutathione s-transferase | EDD54_0495 | Not Available | Positive | 520086 - 520751 | 24358.4 |
| methyl-accepting chemotaxis protein | EDD54_0496 | Not Available | Positive | 520884 - 523217 | 78741.0 |
| pap2 superfamily protein | EDD54_0497 | Not Available | Positive | 523388 - 524512 | 39379.3 |
| nucleoside diphosphate kinase | EDD54_0498 | Not Available | Positive | 524607 - 525029 | 15351.3 |
| acyl-coenzyme a synthetase/amp-(fatty) acid ligase | EDD54_0499 | Not Available | Negative | 525188 - 526696 | 53099.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
