Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formaldehyde activating enzyme | EDD54_0480 | Not Available | Positive | 501994 - 502500 | 17780.2 |
| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | EDD54_0481 | Not Available | Negative | 502685 - 503386 | 23762.3 |
| putative h4mpt-linked c1 transfer pathway protein | EDD54_0482 | Not Available | Positive | 503561 - 504613 | 35543.3 |
| hypothetical protein | EDD54_0483 | Not Available | Positive | 504908 - 505840 | 33192.0 |
| exodeoxyribonuclease-3 | EDD54_0484 | Not Available | Negative | 505872 - 506663 | 29150.6 |
| hypothetical protein | EDD54_0485 | Not Available | Positive | 506835 - 507659 | 29918.0 |
| hypothetical protein | EDD54_0486 | Not Available | Positive | 507916 - 508260 | 12201.8 |
| dna polymerase-3 subunit alpha | EDD54_0487 | Not Available | Positive | 508442 - 511903 | 125816.0 |
| uracil-dna glycosylase family 4 | EDD54_0488 | Not Available | Negative | 512038 - 512694 | 23691.3 |
| trna g18 (ribose-2'-o)-methylase spou | EDD54_0489 | Not Available | Negative | 512896 - 513699 | 27630.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
