Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal subunit interface protein | EDD54_4322 | Not Available | - | 4674486 - 4675073 | 20872.6 |
| rna polymerase rpon-/sigl-like sigma 54 subunit | EDD54_4323 | Not Available | - | 4675308 - 4676828 | 54884.1 |
| lipopolysaccharide export system atp-binding protein | EDD54_4324 | Not Available | - | 4676931 - 4677701 | 27791.7 |
| lipopolysaccharide export system protein lpta | EDD54_4325 | Not Available | - | 4677710 - 4678306 | 20622.5 |
| lipopolysaccharide export system protein lptc | EDD54_4326 | Not Available | - | 4678303 - 4679031 | 25036.6 |
| ribonuclease d | EDD54_4327 | Not Available | - | 4679205 - 4679819 | 22874.3 |
| Trna-leu | Not Available | Not Available | + | 4679926 - 4680010 | Not Available |
| nadh dehydrogenase | EDD54_4329 | Not Available | + | 4680239 - 4681213 | 33871.9 |
| undecaprenyl-diphosphatase | EDD54_4330 | Not Available | - | 4681295 - 4682101 | 28908.2 |
| glutathione s-transferase | EDD54_4331 | Not Available | + | 4682376 - 4683068 | 26217.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
