Oharaeibacter diazotrophicus str. DSM 102969

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Pleomorphomonadaceae

Genus

Oharaeibacter

Description

Oharaeibacter diazotrophicus str. DSM 102969 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This microbe has an optimal growth temperature of 29.0°C, suggesting a preference for moderate environmental conditions. As a member of the domain Bacteria, O. diazotrophicus contributes to nitrogen fixation processes, which are critical for nutrient cycling in various ecosystems. The aerobic nature of this organism indicates its reliance on oxygen for metabolic processes, positioning it within environments where oxygen is readily available. Its non-spore-forming characteristic may imply a vulnerability to adverse conditions, as it lacks the ability to enter a dormant state to withstand extreme environmental stressors. In ecological contexts, the presence of O. diazotrophicus in nitrogen-rich environments could enhance soil fertility and plant growth, making it a potentially beneficial microbe for agricultural applications. Understanding its physiological traits provides insights into its functional roles in nitrogen cycling and ecosystem dynamics, highlighting the importance of microbial diversity in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPleomorphomonadaceae
GenusOharaeibacter
SpeciesOharaeibacter diazotrophicus
StrainDSM 102969

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatrice rhizosphere
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oharaeibacter diazotrophicus str. DSM 102969


Gene Summary

Adenine Count

713704 bp

Thymine Count

703491 bp

Guanine Count

1795972 bp

Cytosine Count

1778725 bp

Genome Length

4991892 bp

Protein-coding Genes

4457 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrate/nitrite transport system atp-binding proteinEDD54_4049Not AvailablePositive4379268 - 438006528728.2
assimilatory nitrite reductase (nad(p)h) large subunit precursorEDD54_4050Not AvailablePositive4380077 - 438252186413.3
assimilatory nitrite reductase (nad(p)h) small subunitEDD54_4051Not AvailablePositive4382518 - 438287412337.7
assimilatory nitrate reductase (nadh) alpha subunit apoproteinEDD54_4052Not AvailablePositive4383095 - 438578293394.1
uroporphyrinogen-iii c-methyltransferaseEDD54_4053Not AvailablePositive4385754 - 438722650815.5
tetr family transcriptional regulatorEDD54_4054Not AvailablePositive4387286 - 438790021581.9
diguanylate cyclase (ggdef)-like proteinEDD54_4055Not AvailableNegative4387876 - 439009879071.4
phenylpropionate dioxygenase-like ring-hydroxylating dioxygenase large terminal subunitEDD54_4056Not AvailablePositive4390284 - 439147745619.3
phytoene dehydrogenase-like proteinEDD54_4057Not AvailablePositive4391961 - 439357757815.8
hypothetical proteinEDD54_4058Not AvailablePositive4393682 - 439474037609.9

Displaying genes 4031 – 4040 of 4567 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.