Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase rpfc | EDD54_4019 | Not Available | Positive | 4340283 - 4342784 | 88193.8 |
| tetr family transcriptional regulator | EDD54_4020 | Not Available | Positive | 4342931 - 4343569 | 23265.7 |
| cupin domain | EDD54_4021 | Not Available | Positive | 4343566 - 4344018 | 16107.5 |
| dsf synthase | EDD54_4022 | Not Available | Negative | 4344164 - 4345165 | 36796.3 |
| dna-binding marr family transcriptional regulator | EDD54_4023 | Not Available | Positive | 4345585 - 4346082 | 17185.6 |
| hypothetical protein | EDD54_4024 | Not Available | Negative | 4346070 - 4346246 | 6760.57 |
| n-acetylglucosamine 6-phosphate deacetylase | EDD54_4025 | Not Available | Negative | 4346231 - 4347382 | 38712.0 |
| glutamine--fructose-6-phosphate transaminase | EDD54_4026 | Not Available | Negative | 4347382 - 4348413 | 35029.8 |
| gntr family transcriptional regulator | EDD54_4027 | Not Available | Negative | 4348416 - 4349174 | 26372.9 |
| glucosamine kinase | EDD54_4028 | Not Available | Negative | 4349171 - 4350049 | 28933.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
