Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general l-amino acid abc transporter membrane protein | EDD54_0938 | Not Available | Negative | 1018199 - 1019401 | 42971.5 |
| general l-amino acid transport system substrate-binding protein | EDD54_0939 | Not Available | Negative | 1019518 - 1020546 | 36461.1 |
| dna-binding lrp family transcriptional regulator | EDD54_0940 | Not Available | Negative | 1021152 - 1021589 | 15785.1 |
| arginase | EDD54_0941 | Not Available | Positive | 1021719 - 1022645 | 32655.2 |
| ornithine cyclodeaminase | EDD54_0942 | Not Available | Positive | 1022658 - 1023710 | 37745.1 |
| cystathionine beta-lyase | EDD54_0943 | Not Available | Positive | 1023820 - 1025004 | 42165.3 |
| hypothetical protein | EDD54_0944 | Not Available | Negative | 1025272 - 1025670 | 14277.0 |
| enolase | EDD54_0945 | Not Available | Negative | 1025935 - 1027209 | 44785.2 |
| response regulator receiver modulated diguanylate cyclase | EDD54_0946 | Not Available | Negative | 1027718 - 1029088 | 50910.6 |
| two-component system cell cycle response regulator divk | EDD54_0947 | Not Available | Negative | 1029109 - 1029480 | 13818.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
