Paracandidimonas soli str. DSM 100048

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Paracandidimonas

Description

Paracandidimonas soli strain DSM 100048 is a Gram-negative, rod-shaped bacterium that exhibits facultative aerobe/anaerobe characteristics and thrives optimally at a temperature of 25.0°C. The organism is noted for its non-spore-forming nature, indicating that it does not produce spores as a means of survival under adverse conditions. As a facultative organism, P. soli has the metabolic flexibility to grow in both the presence and absence of oxygen, which may allow it to occupy diverse ecological niches. This trait could facilitate its survival in various environments where oxygen levels fluctuate. The optimal growth temperature of 25.0°C suggests a potential adaptation to temperate climates, possibly aligning with environments such as soil or decaying organic matter where it may play a role in nutrient cycling. The specific ecological role of Paracandidimonas soli str. DSM 100048 remains to be fully elucidated; however, its metabolic capabilities may contribute to the degradation of organic materials, thereby influencing soil health and fertility. Further research is necessary to explore its interactions with other soil microorganisms and its potential applications in biotechnology or environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusParacandidimonas
SpeciesParacandidimonas soli
StrainDSM 100048

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracandidimonas soli str. DSM 100048


Gene Summary

Adenine Count

713337 bp

Thymine Count

745778 bp

Guanine Count

1256498 bp

Cytosine Count

1177097 bp

Genome Length

3892807 bp

Protein-coding Genes

3513 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1557633 - 1557648Not Available
Hypothetical proteinEV686_10376Not Available-1572119 - 157271222106.2
hypothetical proteinEV686_10377Not Available-1572705 - 15729719811.97
hypothetical proteinEV686_10378Not Available-1572965 - 15730603797.42
Putative integraseEV686_10379Not Available-1573057 - 157437050470.6
AttrNot AvailableNot Available+1574576 - 1574591Not Available
Portal vertex proteinEV686_10380Not Available-1575397 - 157642538803.0
Terminase large subunitEV686_10381Not Available-1576425 - 157817666869.9
Capsid scaffolding proteinEV686_10382Not Available+1578316 - 157913730197.4
Capsid proteinEV686_10383Not Available+1579192 - 158021438073.9

Displaying genes 1 – 10 of 3687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

15 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0002715(6S)-5-formyl-5,6,7,8-tetrahydrofolateC20H21N7O7Chemical structure of (6S)-5-formyl-5,6,7,8-tetrahydrofolateNot available
Average471.431Da
Monoisotopic471.1513432Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003334aldehydo-D-ribose 5-phosphateC5H11O8PChemical structure of aldehydo-D-ribose 5-phosphateNot available
Average230.1098Da
Monoisotopic230.0191538Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003701L-methionine (S)-S-oxideC5H11NO3SChemical structure of L-methionine (S)-S-oxide62697-73-8
Average165.21Da
Monoisotopic165.045964392Da

Displaying 1–10 of 15 metabolites