Rodentibacter trehalosifermentans

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter trehalosifermentans is a Gram-negative, microaerophilic bacterium that has garnered interest due to its unique metabolic capabilities. As a member of the genus Rodentibacter, this microbe displays specific growth requirements, thriving in environments with lower oxygen concentrations than are typically found in the atmosphere. The microaerophilic nature of R. trehalosifermentans suggests that it may inhabit environments where oxygen levels fluctuate, such as in the gastrointestinal tracts of various rodents or in other organic-rich, anaerobic habitats. The Gram-negative cell wall structure of R. trehalosifermentans is characterized by a thin peptidoglycan layer surrounded by an outer membrane, which may contribute to its adaptability in diverse ecological niches. This structural feature is common among many bacteria and is associated with certain physiological characteristics, including resistance to some antimicrobial agents. The ability of R. trehalosifermentans to ferment trehalose indicates a specialized metabolic pathway, which could play a role in its ecological interactions, such as nutrient cycling in its habitat. Considering the bacterium's microaerophilic requirement and its metabolic capabilities, it may serve as a crucial player in the microbial community dynamics within rodent-associated ecosystems. Further investigation into its ecological role could reveal insights into the nutrient exchange processes and microbial interactions in these environments, highlighting the importance of understanding microbial diversity in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter trehalosifermentans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter trehalosifermentans

Accession NumberMLHK00000000.1

Gene Summary

Adenine Count

756882 bp

Thymine Count

762207 bp

Guanine Count

523689 bp

Cytosine Count

528761 bp

Genome Length

2571539 bp

Protein-coding Genes

2332 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
d-alanyl-d-alanine endopeptidaseBKK51_01625Not Available-335833 - 33670832584.8
bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmnBKK51_01630Not Available+336921 - 33806942859.9
type iv pilus biogenesis/stability protein pilwBKK51_01635Not Available+338091 - 33863620773.7
hypothetical proteinBKK51_01640Not Available+338706 - 33970737067.5
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseBKK51_01645Not Available+339710 - 34081640131.6
histidine--trna ligaseBKK51_01650Not Available+340826 - 34209747402.9
hypothetical proteinBKK51_01655Not Available+342116 - 34273022345.3
isoprenylcysteine carboxyl methyltransferaseBKK51_01660Not Available+342763 - 34320617223.7
superoxide dismutaseBKK51_01665Not Available-343249 - 34389324009.5
heme abc transporter atp-binding protein ccmaBKK51_01670Not Available+344169 - 34480723887.7

Displaying genes 481 – 490 of 2518 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites