Rodentibacter myodis

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter myodis is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement. This organism displays a distinct cellular structure typical of Gram-negative bacteria, possessing a thin peptidoglycan layer surrounded by an outer membrane, which is a characteristic feature of this group. The microaerophilic nature of R. myodis indicates that it thrives in environments with reduced oxygen levels, which may influence its metabolic pathways and ecological niches. While specific pathogenicity or ecological roles are not detailed in the available data, the traits of R. myodis suggest potential associations with rodent hosts or similar environments where microaerophilic conditions are prevalent. Such habitats could include the gastrointestinal tracts of rodents or decomposing organic matter, where oxygen levels are limited but not entirely absent. The unique combination of being a Gram-negative and microaerophilic organism positions R. myodis within a specialized ecological framework, potentially allowing it to participate in nutrient cycling or symbiotic relationships within its habitat. Further studies would be beneficial to elucidate its ecological interactions and physiological roles in the environments it inhabits.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter myodis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter myodis

Accession NumberMLHQ00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2140 genes

Non-Coding Genes

176 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
xylose abc transporter atp-binding proteinBKL49_08875Not Available+1834146 - 183565755791.5
sugar abc transporter permeaseBKL49_08880Not Available+1835661 - 183678839785.8
xylr family transcriptional regulatorBKL49_08885Not Available+1836898 - 183806144652.5
lipooligosaccharide biosynthesis protein lpsaBKL49_08890Not Available-1838105 - 183887529670.0
3,4-dihydroxy-2-butanone-4-phosphate synthaseBKL49_08895Not Available-1838965 - 183961223089.6
hypothetical proteinBKL49_08905Not Available+1841073 - 184175626089.1
Trna-argNot AvailableNot Available+1841815 - 1841891Not Available
Trna-argNot AvailableNot Available+1841945 - 1842021Not Available
Trna-serNot AvailableNot Available+1842042 - 1842135Not Available
atp-dependent dna helicase repBKL49_08925Not Available-1842279 - 184429177437.9

Displaying genes 1731 – 1740 of 2316 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites