Rodentibacter myodis

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter myodis is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement. This organism displays a distinct cellular structure typical of Gram-negative bacteria, possessing a thin peptidoglycan layer surrounded by an outer membrane, which is a characteristic feature of this group. The microaerophilic nature of R. myodis indicates that it thrives in environments with reduced oxygen levels, which may influence its metabolic pathways and ecological niches. While specific pathogenicity or ecological roles are not detailed in the available data, the traits of R. myodis suggest potential associations with rodent hosts or similar environments where microaerophilic conditions are prevalent. Such habitats could include the gastrointestinal tracts of rodents or decomposing organic matter, where oxygen levels are limited but not entirely absent. The unique combination of being a Gram-negative and microaerophilic organism positions R. myodis within a specialized ecological framework, potentially allowing it to participate in nutrient cycling or symbiotic relationships within its habitat. Further studies would be beneficial to elucidate its ecological interactions and physiological roles in the environments it inhabits.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter myodis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter myodis

Accession NumberMLHQ00000000.1

Gene Summary

Adenine Count

729520 bp

Thymine Count

726777 bp

Guanine Count

500152 bp

Cytosine Count

509828 bp

Genome Length

2466277 bp

Protein-coding Genes

2140 genes

Non-Coding Genes

176 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
acetolactate synthase small subunitBKL49_07760Not Available+1604895 - 160538618214.2
carboxymuconolactone decarboxylaseBKL49_07765Not Available-1605804 - 160691340790.1
hypothetical proteinBKL49_07770Not Available-1606959 - 16071446972.25
alpha/beta hydrolaseBKL49_07775Not Available-1607236 - 160834540880.5
2,5-diketo-d-gluconic acid reductaseBKL49_07780Not Available-1608419 - 160926131799.1
lysr family transcriptional regulatorBKL49_07785Not Available+1609383 - 161027934137.5
peptide abc transporter atp-binding proteinBKL49_07790Not Available-1610572 - 161139331022.4
peptide abc transporter atp-binding proteinBKL49_07795Not Available-1611397 - 161245239489.1
peptide abc transporter permeaseBKL49_07800Not Available-1612455 - 161334233119.2
peptide abc transporter permeaseBKL49_07805Not Available-1613332 - 161429736076.2

Displaying genes 1511 – 1520 of 2316 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites