Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. GAS231 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. GAS231
Accession NumberNZ_LT629703.1
Gene Summary
Adenine Count
1417252 bp
Thymine Count
1416285 bp
Guanine Count
2376347 bp
Cytosine Count
2374252 bp
Genome Length
7584236 bp
Protein-coding Genes
7079 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | BLS26_RS03915 | Not Available | - | 833395 - 833808 | 15704.9 |
| lysr family substrate-binding domain-containing protein | BLS26_RS03920 | Not Available | + | 833856 - 834530 | 25140.8 |
| efflux rnd transporter permease subunit | BLS26_RS03925 | Not Available | - | 834767 - 837919 | 114396.0 |
| efflux rnd transporter periplasmic adaptor subunit | BLS26_RS03930 | Not Available | - | 837916 - 838992 | 37769.6 |
| efflux rnd transporter periplasmic adaptor subunit | BLS26_RS03935 | Not Available | - | 838989 - 840122 | 39205.5 |
| sensor histidine kinase | BLS26_RS03940 | Not Available | - | 840119 - 840934 | 28972.3 |
| tetr/acrr family transcriptional regulator | BLS26_RS03945 | Not Available | + | 841152 - 841814 | 24337.4 |
| tetr/acrr family transcriptional regulator | BLS26_RS03950 | Not Available | - | 841830 - 842483 | 23658.7 |
| hypothetical protein | BLS26_RS03955 | Not Available | - | 842495 - 842932 | 16430.8 |
| hypothetical protein | BLS26_RS03960 | Not Available | - | 842937 - 843284 | 12533.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
