Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. GAS231 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. GAS231
Accession NumberNZ_LT629703.1
Gene Summary
Adenine Count
1417252 bp
Thymine Count
1416285 bp
Guanine Count
2376347 bp
Cytosine Count
2374252 bp
Genome Length
7584236 bp
Protein-coding Genes
7079 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BLS26_RS36235 | Not Available | - | 1062158 - 1062322 | 5955.6 |
| abc transporter permease subunit | BLS26_RS05070 | Not Available | + | 1062621 - 1063538 | 32667.3 |
| high-affinity branched-chain amino acid abc transporter permease livm | BLS26_RS05075 | Not Available | + | 1063583 - 1064890 | 47068.9 |
| abc transporter atp-binding protein | BLS26_RS05080 | Not Available | + | 1064887 - 1065729 | 30444.7 |
| abc transporter atp-binding protein | BLS26_RS05085 | Not Available | + | 1065726 - 1066472 | 26810.8 |
| branched-chain amino acid abc transporter substrate-binding protein | BLS26_RS05090 | Not Available | + | 1066638 - 1067756 | 39983.6 |
| hamp domain-containing protein | BLS26_RS05095 | Not Available | + | 1068025 - 1074309 | 224991.0 |
| hwe histidine kinase domain-containing protein | BLS26_RS05100 | Not Available | + | 1074326 - 1075792 | 54049.6 |
| response regulator | BLS26_RS05105 | Not Available | - | 1075864 - 1076250 | 13902.0 |
| pas domain s-box protein | BLS26_RS05110 | Not Available | + | 1076599 - 1079376 | 100184.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
