Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. GAS231 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. GAS231
Accession NumberNZ_LT629703.1
Gene Summary
Adenine Count
1417252 bp
Thymine Count
1416285 bp
Guanine Count
2376347 bp
Cytosine Count
2374252 bp
Genome Length
7584236 bp
Protein-coding Genes
7079 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | BLS26_RS31495 | Not Available | - | 6722385 - 6725633 | 116970.0 |
| efflux rnd transporter periplasmic adaptor subunit | BLS26_RS31500 | Not Available | - | 6725746 - 6726966 | 43605.9 |
| response regulator transcription factor | BLS26_RS31505 | Not Available | + | 6727369 - 6728043 | 24752.1 |
| sensor histidine kinase | BLS26_RS31510 | Not Available | + | 6728045 - 6729376 | 48349.2 |
| polyhydroxyalkanoate synthesis regulator dna-binding domain-containing protein | BLS26_RS36090 | Not Available | - | 6729381 - 6729582 | 7429.62 |
| plp-dependent aminotransferase family protein | BLS26_RS31515 | Not Available | + | 6729641 - 6731125 | 54890.1 |
| fmn-binding negative transcriptional regulator | BLS26_RS31520 | Not Available | + | 6731210 - 6731839 | 22780.1 |
| dmt family transporter | BLS26_RS31525 | Not Available | + | 6731877 - 6732323 | 15266.4 |
| trap transporter large permease | BLS26_RS31530 | Not Available | - | 6732374 - 6733975 | 57314.0 |
| trap transporter small permease subunit | BLS26_RS31535 | Not Available | - | 6733972 - 6734511 | 20357.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
