Afipia sp. GAS231

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia sp. GAS231
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afipia sp. GAS231

Accession NumberNZ_LT629703.1

Gene Summary

Adenine Count

1417252 bp

Thymine Count

1416285 bp

Guanine Count

2376347 bp

Cytosine Count

2374252 bp

Genome Length

7584236 bp

Protein-coding Genes

7079 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hydroxysqualene dehydroxylase hpneBLS26_RS29870Not Available+6351606 - 635286544658.9
squalene--hopene cyclaseBLS26_RS29875Not Available+6352925 - 635488672510.6
phosphorylaseBLS26_RS29880Not Available+6354883 - 635563225480.0
adenosyl-hopene transferase hpnhBLS26_RS29885Not Available-6355712 - 635687243142.3
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseBLS26_RS29890Not Available-6356913 - 635784233195.9
mmpl family transporterBLS26_RS29895Not Available+6358275 - 636086392150.9
duf2147 domain-containing proteinBLS26_RS29900Not Available-6360831 - 636151723567.1
aminobacteriohopanetriol synthase hpnoBLS26_RS29905Not Available+6361621 - 636301250444.3
anti-sigma factor family proteinBLS26_RS29910Not Available-6363165 - 636392927968.3
sigma-70 family rna polymerase sigma factorBLS26_RS29915Not Available-6363926 - 636448621476.5

Displaying genes 6011 – 6020 of 7136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites