Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. GAS231 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. GAS231
Accession NumberNZ_LT629703.1
Gene Summary
Adenine Count
1417252 bp
Thymine Count
1416285 bp
Guanine Count
2376347 bp
Cytosine Count
2374252 bp
Genome Length
7584236 bp
Protein-coding Genes
7079 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo-hept-4-ene-1,7-dioate hydratase | BLS26_RS29770 | Not Available | - | 6323707 - 6324513 | 28940.7 |
| homoprotocatechuate degradation operon regulator hpar | BLS26_RS29775 | Not Available | + | 6324730 - 6325194 | 17353.1 |
| abc transporter substrate-binding protein | BLS26_RS29780 | Not Available | + | 6325489 - 6326634 | 40246.0 |
| branched-chain amino acid abc transporter permease | BLS26_RS29785 | Not Available | + | 6326727 - 6327599 | 30810.8 |
| abc transporter permease subunit | BLS26_RS29790 | Not Available | + | 6327596 - 6329377 | 62621.9 |
| abc transporter atp-binding protein | BLS26_RS29795 | Not Available | + | 6329377 - 6330105 | 25560.4 |
| hpch/hpai aldolase family protein | BLS26_RS29800 | Not Available | + | 6330280 - 6331059 | 28009.9 |
| uxaa family hydrolase | BLS26_RS29805 | Not Available | + | 6331119 - 6332642 | 53430.1 |
| duf2126 domain-containing protein | BLS26_RS29810 | Not Available | + | 6332878 - 6336150 | 122098.0 |
| circularly permuted type 2 atp-grasp protein | BLS26_RS29815 | Not Available | + | 6336301 - 6338856 | 92634.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
