Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. GAS231 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. GAS231
Accession NumberNZ_LT629703.1
Gene Summary
Adenine Count
1417252 bp
Thymine Count
1416285 bp
Guanine Count
2376347 bp
Cytosine Count
2374252 bp
Genome Length
7584236 bp
Protein-coding Genes
7079 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BLS26_RS27415 | Not Available | + | 5778333 - 5778557 | 8201.79 |
| sdr family nad(p)-dependent oxidoreductase | BLS26_RS27420 | Not Available | - | 5778584 - 5779339 | 26758.8 |
| pyridoxamine 5'-phosphate oxidase | BLS26_RS27425 | Not Available | - | 5779339 - 5779980 | 24147.6 |
| rt0821/lpp0805 family surface protein | BLS26_RS27430 | Not Available | + | 5780100 - 5780507 | 14435.6 |
| dnaj c-terminal domain-containing protein | BLS26_RS27435 | Not Available | + | 5780604 - 5781572 | 34045.4 |
| anti-sigma factor family protein | BLS26_RS27440 | Not Available | - | 5781986 - 5782756 | 27865.8 |
| rna polymerase sigma factor | BLS26_RS27445 | Not Available | - | 5782901 - 5783389 | 18214.2 |
| histidine phosphatase family protein | BLS26_RS27450 | Not Available | + | 5783648 - 5784247 | 21913.1 |
| chorismate synthase | BLS26_RS27455 | Not Available | + | 5784443 - 5785531 | 38925.4 |
| gmc family oxidoreductase | BLS26_RS27460 | Not Available | - | 5785557 - 5787251 | 62203.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
