Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. GAS231 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. GAS231
Accession NumberNZ_LT629703.1
Gene Summary
Adenine Count
1417252 bp
Thymine Count
1416285 bp
Guanine Count
2376347 bp
Cytosine Count
2374252 bp
Genome Length
7584236 bp
Protein-coding Genes
7079 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome, methanol metabolism-related | BLS26_RS08855 | Not Available | - | 1854467 - 1854964 | 17854.8 |
| lanthanide-dependent methanol dehydrogenase xoxf5 | BLS26_RS08860 | Not Available | - | 1855062 - 1856867 | 64887.6 |
| helix-turn-helix domain-containing protein | BLS26_RS08870 | Not Available | + | 1857304 - 1858272 | 36048.1 |
| tonb-dependent receptor | BLS26_RS08875 | Not Available | - | 1858314 - 1860776 | 87349.1 |
| histidine kinase | BLS26_RS08880 | Not Available | - | 1860950 - 1862320 | 49120.0 |
| response regulator transcription factor | BLS26_RS08885 | Not Available | + | 1862544 - 1863164 | 22221.9 |
| s-formylglutathione hydrolase | BLS26_RS08890 | Not Available | + | 1863198 - 1864043 | 30904.6 |
| abc transporter substrate-binding protein | BLS26_RS08895 | Not Available | + | 1864210 - 1865391 | 43140.5 |
| yvtn family beta-propeller repeat protein | BLS26_RS08900 | Not Available | + | 1865424 - 1866395 | 34908.9 |
| abc transporter atp-binding protein | BLS26_RS08905 | Not Available | + | 1866395 - 1867213 | 28605.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
