Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. GAS231 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. GAS231
Accession NumberNZ_LT629703.1
Gene Summary
Adenine Count
1417252 bp
Thymine Count
1416285 bp
Guanine Count
2376347 bp
Cytosine Count
2374252 bp
Genome Length
7584236 bp
Protein-coding Genes
7079 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BLS26_RS08605 | Not Available | + | 1803073 - 1804002 | 33447.4 |
| trap transporter substrate-binding protein dctp | BLS26_RS08610 | Not Available | + | 1804147 - 1805178 | 36895.5 |
| trap transporter small permease | BLS26_RS08615 | Not Available | + | 1805236 - 1805793 | 19876.8 |
| trap transporter large permease | BLS26_RS08620 | Not Available | + | 1805790 - 1807079 | 45610.9 |
| trap transporter substrate-binding protein dctp | BLS26_RS08625 | Not Available | + | 1807122 - 1808165 | 37693.6 |
| caib/baif coa transferase family protein | BLS26_RS08630 | Not Available | + | 1808247 - 1809401 | 42021.3 |
| carboxymuconolactone decarboxylase family protein | BLS26_RS08635 | Not Available | - | 1810174 - 1810743 | 21291.7 |
| hpch/hpai aldolase/citrate lyase family protein | BLS26_RS08640 | Not Available | - | 1810857 - 1811714 | 30702.2 |
| maoc family dehydratase | BLS26_RS08645 | Not Available | - | 1811714 - 1812175 | 17331.9 |
| enoyl-coa hydratase/isomerase family protein | BLS26_RS08650 | Not Available | - | 1812175 - 1812948 | 27849.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
