Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. GAS231 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. GAS231
Accession NumberNZ_LT629703.1
Gene Summary
Adenine Count
1417252 bp
Thymine Count
1416285 bp
Guanine Count
2376347 bp
Cytosine Count
2374252 bp
Genome Length
7584236 bp
Protein-coding Genes
7079 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein j | BLS26_RS07110 | Not Available | - | 1481419 - 1482153 | 25982.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | BLS26_RS07115 | Not Available | - | 1482150 - 1482560 | 14498.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | BLS26_RS07120 | Not Available | - | 1482535 - 1482999 | 17026.8 |
| type ii secretion system major pseudopilin gspg | BLS26_RS07125 | Not Available | - | 1482992 - 1483483 | 17448.8 |
| type ii secretion system f family protein | BLS26_RS07130 | Not Available | - | 1483500 - 1484711 | 43044.2 |
| gspe/pule family protein | BLS26_RS07135 | Not Available | - | 1484715 - 1486433 | 61989.2 |
| type ii secretion system secretin gspd | BLS26_RS07140 | Not Available | + | 1486703 - 1489027 | 80869.8 |
| tetratricopeptide repeat protein | BLS26_RS07145 | Not Available | + | 1489158 - 1489574 | 15130.3 |
| gsu2403 family nucleotidyltransferase fold protein | BLS26_RS07155 | Not Available | - | 1490403 - 1491545 | 42486.5 |
| duf3363 domain-containing protein | BLS26_RS07160 | Not Available | - | 1491689 - 1492699 | 37364.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
