Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. GAS231 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. GAS231
Accession NumberNZ_LT629703.1
Gene Summary
Adenine Count
1417252 bp
Thymine Count
1416285 bp
Guanine Count
2376347 bp
Cytosine Count
2374252 bp
Genome Length
7584236 bp
Protein-coding Genes
7079 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbe | BLS26_RS07060 | Not Available | - | 1472546 - 1474987 | 89262.6 |
| virb3 family type iv secretion system protein | BLS26_RS07065 | Not Available | - | 1474999 - 1475262 | 9251.66 |
| trbc/virb2 family protein | BLS26_RS07070 | Not Available | - | 1475262 - 1475588 | 11497.1 |
| p-type conjugative transfer atpase trbb | BLS26_RS07075 | Not Available | - | 1475590 - 1476504 | 31507.0 |
| hlyd family efflux transporter periplasmic adaptor subunit | BLS26_RS07080 | Not Available | - | 1476643 - 1477107 | 16498.7 |
| prepilin peptidase | BLS26_RS07085 | Not Available | + | 1477735 - 1478205 | 16166.4 |
| hypothetical protein | BLS26_RS07090 | Not Available | - | 1478202 - 1478822 | 21451.7 |
| type ii secretion system protein gspm | BLS26_RS07095 | Not Available | - | 1478864 - 1479424 | 19100.2 |
| piln domain-containing protein | BLS26_RS07100 | Not Available | - | 1479421 - 1480386 | 34481.6 |
| general secretion pathway protein gspk | BLS26_RS07105 | Not Available | - | 1480529 - 1481356 | 28906.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
