Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. GAS231 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. GAS231
Accession NumberNZ_LT629703.1
Gene Summary
Adenine Count
1417252 bp
Thymine Count
1416285 bp
Guanine Count
2376347 bp
Cytosine Count
2374252 bp
Genome Length
7584236 bp
Protein-coding Genes
7079 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trmj/yjtd family rna methyltransferase | BLS26_RS05410 | Not Available | - | 1132709 - 1133914 | 43742.4 |
| alpha/beta hydrolase family protein | BLS26_RS05415 | Not Available | + | 1134204 - 1135934 | 61915.8 |
| nadp-dependent isocitrate dehydrogenase | BLS26_RS05420 | Not Available | + | 1136063 - 1137274 | 45223.4 |
| duf3455 domain-containing protein | BLS26_RS05425 | Not Available | + | 1137341 - 1137847 | 17019.2 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | BLS26_RS05430 | Not Available | - | 1137882 - 1140203 | 84549.1 |
| hypothetical protein | BLS26_RS05435 | Not Available | + | 1140561 - 1141598 | 37766.2 |
| duf3303 domain-containing protein | BLS26_RS05440 | Not Available | + | 1141629 - 1141916 | 11207.7 |
| haloacid dehalogenase type ii | BLS26_RS05445 | Not Available | + | 1141979 - 1142734 | 27987.5 |
| hypothetical protein | BLS26_RS05450 | Not Available | - | 1142746 - 1142961 | 7744.99 |
| cyclic nucleotide-gated ion channel | BLS26_RS05455 | Not Available | - | 1143145 - 1144374 | 44808.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
