Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis tyrosine autokinase | AES38_RS03670 | Not Available | + | 745862 - 747250 | 48543.4 |
| hypothetical protein | AES38_RS03675 | Not Available | - | 747366 - 748013 | 21653.1 |
| glycosyltransferase family 2 protein | AES38_RS03680 | Not Available | - | 748213 - 750150 | 68429.1 |
| glycosyl transferase | AES38_RS03685 | Not Available | + | 750289 - 751338 | 38520.5 |
| lipopolysaccharide biosynthesis protein | AES38_RS03690 | Not Available | + | 751520 - 753127 | 55793.9 |
| endo-1,4-beta-xylanase | AES38_RS03695 | Not Available | - | 753124 - 754416 | 46817.4 |
| nad-dependent epimerase/dehydratase family protein | AES38_RS03700 | Not Available | + | 754672 - 755718 | 37270.1 |
| tspo/mbr family protein | AES38_RS03705 | Not Available | - | 755752 - 756567 | 27687.2 |
| 30s ribosomal protein s6 | AES38_RS15405 | Not Available | + | 756645 - 756896 | 9081.89 |
| yqjf family protein | AES38_RS03715 | Not Available | + | 757129 - 757875 | 26951.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
