Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase family protein | AES38_RS03480 | Not Available | - | 693089 - 694825 | 59399.2 |
| gnat family n-acetyltransferase | AES38_RS03485 | Not Available | - | 694912 - 695505 | 21809.1 |
| gntr family transcriptional regulator | AES38_RS03490 | Not Available | - | 695546 - 696307 | 27699.3 |
| atp-binding cassette domain-containing protein | AES38_RS03495 | Not Available | - | 696361 - 697272 | 31509.1 |
| abc transporter permease | AES38_RS03500 | Not Available | - | 697269 - 698312 | 36175.1 |
| sugar abc transporter substrate-binding protein | AES38_RS03505 | Not Available | - | 698384 - 699361 | 32540.9 |
| inositol 2-dehydrogenase | AES38_RS03510 | Not Available | - | 699614 - 700621 | 35141.8 |
| sugar phosphate isomerase/epimerase | AES38_RS03515 | Not Available | - | 700663 - 701580 | 32001.5 |
| exem/nuch family extracellular endonuclease | AES38_RS03520 | Not Available | + | 701880 - 704024 | 74300.7 |
| thioredoxin | AES38_RS03525 | Not Available | + | 704110 - 704511 | 14074.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
