Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici
Accession NumberNZ_CP012574.1
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i fructose-bisphosphate aldolase | AES38_RS03385 | Not Available | + | 676373 - 677314 | 32527.0 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | AES38_RS03390 | Not Available | + | 677366 - 678871 | 53282.4 |
| 5-deoxy-glucuronate isomerase | AES38_RS03395 | Not Available | + | 678917 - 679870 | 33651.0 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | AES38_RS03400 | Not Available | + | 679867 - 681783 | 67987.5 |
| hypothetical protein | AES38_RS03405 | Not Available | - | 681870 - 682199 | 12226.2 |
| hypothetical protein | AES38_RS15795 | Not Available | - | 682263 - 682433 | 5341.41 |
| sugar phosphate isomerase/epimerase | AES38_RS03410 | Not Available | + | 682559 - 683536 | 36158.4 |
| 3-hydroxyacyl-coa dehydrogenase family protein | AES38_RS03415 | Not Available | + | 683533 - 684498 | 33974.4 |
| hypothetical protein | AES38_RS03420 | Not Available | - | 684527 - 684874 | 12369.5 |
| 30s ribosomal protein s6 | AES38_RS16530 | Not Available | + | 685726 - 686145 | 14622.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
